A MATLAB reader for MASCOT Generic Format (.mgf) files

Versión 1.2.0 (1,97 KB) por Joris Meurs
Reading MASCOT Generic Format files with MATLAB
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Actualizado 1 jul 2020

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Function to read and extract data from MASCOT Generic Format (.mgf) files
The .mgf format contains minimal metadata (spectrum title, retention
time, precursor mass, precursor intensity and charge) and the
corresponding MS2 spectrum (https://fiehnlab.ucdavis.edu/projects/lipidblast/mgf-files)

INPUT
A character array (1 file) or cell array (multiple files) are optional
input. When the file path is not given as input, files can be browsed for

OUTPUT
The output is a structure containing the following fields:
- scanName: Title given by ProteoWizard (character array)
- precursorMass: Mass of precursor ion (double)
- precursorIntensity: Intensity of precursor ion (double)
- z: Charge of precursor ion (double)
- scanData: MS/MS spectrum (N x 2 cell containing m/z values
and intensities)

Citar como

Joris Meurs (2024). A MATLAB reader for MASCOT Generic Format (.mgf) files (https://www.mathworks.com/matlabcentral/fileexchange/76033-a-matlab-reader-for-mascot-generic-format-mgf-files), MATLAB Central File Exchange. Recuperado .

Compatibilidad con la versión de MATLAB
Se creó con R2017a
Compatible con cualquier versión
Compatibilidad con las plataformas
Windows macOS Linux

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Versión Publicado Notas de la versión
1.2.0

Bug fixed regarding missing charge states

1.1.0

- Fixed error when charge state is absent
- Fixed error when intensity is missing for precursor ion

1.0.0