Respondida
How to upload KEGG file to Simbiology so I can start analyzing.
Hi Juan Carlos, KEGG files can't be imprted into SimBiology as is. You will need to convert them into SBML files first. There ...

más de 6 años hace | 0

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Respondida
In Simbiology, should the categorical variables be assigned as group variable or covariate in the dataset?
Group variable defines an index for a subject/experiment. In your dataset, ID is a group variable. Gender and age can be both co...

más de 6 años hace | 0

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Discussion

SimBiology at PAGE 2019
Fulden and I will have a booth at PAGE next week. Come and chat with us to learn the latest with MATLAB and SimBiology for PK/PD...

más de 6 años hace | 0

Resuelto

Make the vector [1 2 3 4 5 6 7 8 9 10]
In MATLAB, you create a vector by enclosing the elements in square brackets like so: x = [1 2 3 4] Commas are optional, s...

más de 6 años hace

Respondida
Question on specifying input to sbiosimulate
Hi Deepa, there might be different reasons to get this error message. A typical one is when one of the fluxes becomes Inf or Na...

más de 6 años hace | 0

Respondida
Finding non-constant species in Simbiology Object
What you get is not a function handle but an heterogenous array of SimBiology objects. This array contains a mix of different co...

más de 6 años hace | 1

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Respondida
Question on specifying input to sbiosimulate
There is multiple ways to do this: 1- if you want to run multiple simulations, I recommend to use a SimFunction that will take ...

más de 6 años hace | 1

Respondida
Output of sbiosteadystate task
See answer here.

más de 6 años hace | 1

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Respondida
Accessing a variant object
Hi Deepa, you can access the variant content with the dot notation. If your variant is called v, v.Content will be an array of...

más de 6 años hace | 0

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Respondida
How to set up estimation method in sbiofit
Hi Deepa, let me summarize my understanding of your problem and please correct me if I'm wrong: you only have steady state dat...

más de 6 años hace | 0

Respondida
How to run the model in SBML file?
Dear Deepa, there is two ways to simulate a model saved in a sbml file: 1. using the SimBiology App You can open the SimB...

más de 6 años hace | 0

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Enviada

sbioimportBerkeleyMadonna
Imports ODE models in the BerkeleyMadonna(TM) format into a SimBiology(R) model

más de 6 años hace | 4 descargas |

Discussion

Tips and Tricks: Use SimFunction for easy and fast model simulations in scripts
*What is it?* |SimFunction| allows you to _perform multiple simulations in a single line of code_ by providing an interface t...

casi 7 años hace | 0

Respondida
Plot StateData at a certain time point in Simbiology
Dear Göran, indeed, you can achieve this by modifying the piece of code contained in the scan plot. Let's say that you want to...

casi 7 años hace | 0

Enviada

Import SBML file with function definitions into SimBiology
Functions to import SBML files containing function definitions into SimBiology.

más de 9 años hace | 2 descargas |

Resuelto

Times 2 - START HERE
Try out this test problem first. Given the variable x as your input, multiply it by two and put the result in y. Examples:...

más de 9 años hace

Resuelto

Triangle Numbers
Triangle numbers are the sums of successive integers. So 6 is a triangle number because 6 = 1 + 2 + 3 which can be displa...

más de 9 años hace

Resuelto

Find the sum of all the numbers of the input vector
Find the sum of all the numbers of the input vector x. Examples: Input x = [1 2 3 5] Output y is 11 Input x ...

más de 9 años hace

Resuelto

Text processing - Help Johnny write a letter home from camp
Johnny overuses the word 'great'. Write a script that will help him with this and future letters. If a sentence contains more ...

más de 11 años hace