fing barcode from a DNA Sequence

I have a fastq file from that I have to seperate barcode(highlighted with green color) which is sandwiched between V1 and V2. Please suggest which method I can use to obtain this

3 comentarios

KSSV
KSSV el 2 de Jul. de 2019
You have v1 and v2 in hand? Are they known?
anooja thomas
anooja thomas el 3 de Jul. de 2019
yes the are known
Rena Berman
Rena Berman el 1 de Ag. de 2019
(Answers dev) restored edit

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Respuestas (1)

Vismay Raj
Vismay Raj el 2 de Jul. de 2019

0 votos

Maybe what you are looking for can be achieved through substrings this link can be helpfull

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