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I recently have found that I am no longer able to give my difficulty rating for questions on Cody after sucessfully completing a question. This is obviously not a big deal, I was just wondering if this was an issue on my end or if there was some change that I was not aware of.
The option to rate does not pop up after solving a problem, and the rating in general does not even show up anymore when answering questions (though it is visible from problem groups).
I am currently facing a compatibility issue when attempting to load a SimBiology model created in MATLAB 2021a into MATLAB 2023a. Specifically, the code capture functionality does not seem to be working.
If anyone has encountered a similar situation or has insights on how to capture the code for a SimBiology model created in an older version of MATLAB, I would greatly appreciate your guidance. Are there any alternative methods or specific steps that can be followed to ensure successful code capture?
Thank you in advance for your time and expertise.
When solving problems over on Cody, I can almost always view all solutions to a problem after submitting a correct solution of my own. Very rarely, however, this is not the case, and I instead get the following message:
This solution is locked. To view this solution, you need to provide a solution of the same size or smaller.
You may solve another problem from Community group to unlock all the solutions to this problem.
If this happens, then again, I can almost always rectify this by submitting a (correct) solution to a different problem (I take it that the Community group is the implicit group of all problems on Cody --- is it?). But sometimes that, too, fails.
So my question is, why? What are the criteria that determine when all solutions are, in fact, unlocked?
Simple question: I noticed there's a Modeling & Simulation Challenge Master badge over on Cody, but I can't find the corresponding group. So: where is it? Does it still exist at all?
Error: The server timed out while running and assessing your solution in MATLAB CODY. How do I resolve this? My code is correct. I have run it on PC. But, when i submit in CODY the server throws an error.
Dear community,
I would like to develop a fermentation model with 4 ODEs, one of which contains variable y. A "repeated assignment", e. g. y=5x+5, contains variable x that has been measured each second. These data (columns with time and corresponding value x in each row) are recorded in the Excel file.
Does anyone have any suggestion how to implement this in symbiology?
Thank you very much in advance,
Tetiana
Hi,
I want to develop a PK model based on some PK data. The PK data seems to display 2 peaks when one initial dose is given.
I would like to give one dose. A fraction of this dose (fr) is absorbed following the linear relationship - ka*Drug the other fraction (1-fr) is absorbed following a linear absorption (ka1*Drug) with a Tlag (it maybe a zero order). The fraction fr is unknown so it must be estimate.
Does anyone have can provide any suggestion to implement this in symbiology or provide a link where I can look?
Thank you very much in advance,
Ferran
I have a species which is absorbed in a zero-order manner. I want to model the reaction rate as "UptakeRate*ActiveState". So I can give value of 1 or 0 to ActivateState to control the active state of this process. The species itself is under control multiple processes, so I want to use Event to automatically change the active state of absorption.
However, when I use these two events:
Event 1，trigger: species > 0, Function: ActiveState =1; Event 2, trigger: species <=0, Function: ActiveState=0
The simulation seems to be stuck without stop.
Is there any way to solve this ? Thanks
Just in case, I have my license of MATLAB. I just have this question and I didn't find any information. I wouldn't like to create another account, for this reason I prefer to ask here.
Hi,
Im a new user of simbiology, can any one tell me How to fix a parameters to a known constant when estimating models.
Hello,
In the previous versions, we were able to change the reaction line properties to Reactant, Product, or Reactant and Product. This option is not available in 2021b. How do we change the proerpties if we reaction line is both Reactant and Product?
Thanks
Simulations and model results do not get exported to the MATLAB workspace automatically. 2021b. Under Model Analyzer preferences, I checked "export results when model run is complete", but to no effect. I have to manually expert simulations after each run. Please advise. Thanks RD
I have submitted a problem in cody some days back. Now it is not showing in my profile. Initially it was accepted and some people submitted the solutions also, however It has been removed after that, are there some guidelines which I am not following?
Hi everyone
I am a new of this community and I very interested in this forum and Matlab.I am trying to submit a soultion but as tiltle my code has a built-in function so the test systerm dont reconisie it.It run completely ok on my computer.
This is problem
This is my solution
function [boOut] = BoIfPointInPoly(PolyMatrix,p_test)
%Summary of this function goes here
%{
if we draw a line from test point to a central point of a side of The polygon
then we extend that line to the furthest point of the polygon ensure that
line go through all side of Polygon in 1 direction.I call that line is line_test
Next find number of intersert of line test and all sides w polyxpoly
function
num interset point is odd mean p_test inside
num interset point is even mean p_test outside
this solution go from the concept that if a line go in from a side it has go out
from other side.So if it go in but not go out that mean it start from
inside.
%}
% Detailed explanation goes here
%line from p test throuh central of a side to furthest point of polygon
%find vector
V = ((PolyMatrix(1,:) + PolyMatrix(2,:)) /2) - p_test ;
%draw that vector to furtest point
pend = p_test + V * max(PolyMatrix(:));
%with multi of V and biggest element I assume that line will go all out the
%polygon which ensure out logic will right
line_test = [p_test ; pend];
disp('Our line test\n');
disp(line_test);
%find interst point
p_inter = polyxpoly(PolyMatrix(:,1),PolyMatrix(:,2),line_test(:,1),line_test(:,2));
%find number of interset (row)
[numIntere,trash] = size(p_inter);
disp('Number of interest point:');
disp(numIntere);
%determine in or out
if (rem(numIntere,2) == 0)
boOut = 0;
else
boOut = 1;
end
end
Can anyone has solution.
I'm trying to solve one problem in Cody, but a function 'fmincon' is not recognized by the online compiler. Is there any way to use functions in optimization toolbox in Cody?
I already solved some problems in Cody, why does he not increase my points or allow me to earn badges?
I need to put a number of problems on MATLAB cody under same Problem group, as many other people have done.
Can anyone please help me on this.
Hello
I would like to pulse an input species. I read in the forums that repeated assignments can be used for this, but I am not exactly sure how to implement this. This is the MATLAB code that resembles what I would like the input pattern to be:
t = 0:1/1e3:60; d = [10:2:30]'; x = @rectpuls; y = pulstran(t,d,x);
plot(t,y)
hold off
xlabel('Time (s)')
ylabel('Waveform')
Thanks for any help! Aaron
I created a problem in Cody that approximates e. To test the user's solution, I compare their solution to e. What I want to do instead is compare the user's solution to my reference solution. The question is how do I call the reference solution in the test suite?
This is currently my test suite.
sol=exp(1);
y_correct = playgame();
assessVariableEqual('y_correct',sol);
I created several problems recently in CODY. Some of them got removed automatically. I was curious as to why.
It is possible that the problems used latex in their description, so I am not sure if that was the reason they got rejected by the cody server.
