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Dear contest participants,
The 2024 Community Contest—MATLAB Shorts Mini Hack—is just one week away! Last year, we challenged you to create a 48-frame, 2-second animation. This year, we're doubling the fun by increasing the frame count to 96 and adding audio support. Your mission? Create a short movie!
As always, whether you are a seasoned MATLAB user or just a beginner, you can participate in the contest and have opportunities to win amazing prizes.
Timeframe:
- The contest will run for 5 weeks, from Oct. 7th to Nov. 10th, Eastern Time.
General Rules:
- The first week is dedicated to entry creation, and the fifth week is reserved for voting only.
- Create a 96-frame, 4-second animation and add audio. We will loop it 3 times to create a 12-second short movie for you.
- The character limit remains at 2,000 characters.
Prizes
- You will have opportunities to win compelling prizes, including Amazon gift cards, MathWorks T-shirts, and virtual badges. We will give out both weekly prizes and grand prizes.
Warm-up!
With one week left before the contest begins, we recommend you warm up by reading a fantastic article: Walkthrough: making Little Nemo's airship in MATLAB by @Tim. The article shares both technical insights and the challenges encountered along the way.
The MATLAB Central Community Team
Dear MATLAB contest enthusiasts,
In the 2023 MATLAB Mini Hack Contest, Tim Marston captivated everyone with his incredible animations, showcasing both creativity and skill, ultimately earning him the 1st prize.
We had the pleasure of interviewing Tim to delve into his inspiring story. You can read the full interview on MathWorks Blogs: Community Q&A – Tim Marston.
Last question: Are you ready for this year’s Mini Hack contest?
Hi All,
I'm currently verifying a global sensitivity analysis done in SimBiology and I'm a touch confused. This analysis was run with every parameter and compartment volume in the model. To my understanding the fraction of unexplained variance is 1 - the sum of the first order variances, therefore if the model dynamics are dominated by interparameter effects you might see a higher fraction of unexplained variance. In this analysis however, as the attached figure shows (with input at t=20 minutes), the most sensitive four parameters seem to sum, in first order sensitivities to roughly one at each time point and the total order sensitivies appear nearly identical. So how is the fraction of unexplained variance near one?
Thank you for your help!
Hi to everyone!
To simplify the explanation and the problem, I simulated the kinetics of an irreversible first-order reaction, A -> B. I implemented it in two independent compartments, R and P. I simulated the effect of a dilution in R by doubling at t= 0,1 the R volume. I programmed in P that, at t = 0.1, the instantaneous concentration of A and B would be reduced by half. I am sending an attach with the implementation of these simulations in the Simbiology interface.
When the simulations of the two compartments are plotted, it can be seen that the responses are not equal. That is, from t = 0.1 s, the reaction follow an exponential function in R with half of the initial amplitude and half of the initial value of k1. That is, the relaxation time is doubled. Meanwhile, in P, from t = 0.1, the reaction follows exponential kinetics with half the amplitude value but maintaining the initial value of k = 10. Without a doubt, the correct simulation is the latter (compartment P) where only the effect is observed in the amplitude and not in the relaxation time. Could you tell me what the error is that makes these kinetics that should be equal not be?
Thank you in advance!
Luis B.
Hi All,
I've been producing a QSP model of glucose homeostasis for a while now for my PhD project, recently I've been able to expand it to larger time series, i.e. 2 days of data rather than a singular injection or a singular meal. My problem is as follows: If I put 75g of glucose into my stomach glucose species any later than (exactly) 8.5 hours I get an integration tolerance error. Curiosly, I can put 25g of glucose in at any time up to 15.9 hours, then any later an error. I have disabled all connections to my glucose absorption chain, i.e. stomach -> duodenum -> jenenum -> ileum -> removal, to isolate the cause of this. I had initially thought it may be because I mechanistically model liver glycogen and that does deplete over time, but I've tested enough to show that that does nothing. My next test is to isolate the glucose absorption chain into a seperate model and see if the issue persists but I'm completely baffled!
These are the equations, to my eye there's no reason why there would be such a sharp glucose quantity/time dependence, they all begin at a value of 0:
d(Gs)/dt = -(kw*(1-Gd^14/(Igd^14+Gd^14))*Gs) #Stomach glucose
d(Gd)/dt = (kw*(1-Gd^14/(Igd^14+Gd^14))*Gs) - (kdj*Gd) #Duodenal Glucose
d(Gj)/dt = (kdj*Gd) - (kji*Gj) #Jejunal Glucose
d(Gi)/dt = (kji*Gj) - (kic*Gi) #Ileal Glucose
(The sigmoidicity of gastric emptying slowing term (^14) was parameterised off of paracetamol absorption data and appears to be correct!)
Thank you for your help, best regards,
Dan
Pre-Edit: I changed the run time to 30 hours and now I can't use the 75g input any later than 7.9 hours not 8.5 hours anymore!
Edit: This is how it appears at all times prior to it failing for 75g:
Dear MATLAB contest enthusiasts,
I believe many of you have been captivated by the innovative entries from Zhaoxu Liu / slanderer, in the 2023 MATLAB Flipbook Mini Hack contest.
Ever wondered about the person behind these creative entries? What drives a MATLAB user to such levels of skill? And what inspired his participation in the contest? We were just as curious as you are!
We were delighted to catch up with him and learn more about his use of MATLAB. The interview has recently been published in MathWorks Blogs. For an in-depth look into his insights and experiences, be sure to read our latest blog post: Community Q&A – Zhaoxu Liu.
But the conversation doesn't end here! Who would you like to see featured in our next interview? Drop their name in the comments section below and let us know who we should reach out to next!
Join us for a hands-on workshop focussing on Global Sensitivity Analysis (GSA) for QSP using SimBiology. This complimentary session aims to give you theoretical background and hands-on experience with GSA methods.
🗓️ Event Details: June 25, 1-5pm CEST @PAGE 2024, Rome
🔖 Registration: Free, but space is limited. Early registration is recommended to ensure your place in this workshop.
For more details and to register, please visit https://www.mathworks.com/company/events/seminars/global-sensitivity-analysis-with-simbiology-4361208.html
Hi All,
I'm trying to produce some nice figures from the graphical user interface and have a set of local sensitivity analyses that I'd like to combine.
I have two inputs that vary the sensitivies of my system and would like to plot them on top of each other like:
Is there either a way to do this natively in simbiology (when you try and use 'keep results from each run' it plots them both as a time series) or to export the sensitivity data to the normal matlab programatic UI where I can combine them by hand?
Thank you for your help!
Greetings to all MATLAB users,
Although the MATLAB Flipbook contest has concluded, the pursuit of ‘learning while having fun’ continues. I would like to take this opportunity to highlight some recent insightful technical articles from a standout contest participant – Zhaoxu Liu / slandarer.
Zhaoxu has contributed eight informative articles to both the Tips & Tricks and Fun channels in our new Discussions area. His articles offer practical advice on topics such as customizing legends, constructing chord charts, and adding color to axes. Additionally, he has shared engaging content, like using MATLAB to create an interactive dragon that follows your mouse cursor, a nod to the upcoming Year of the Dragon in 2024!
I invite you to explore these articles for both enjoyment and education, and I hope you'll find new techniques to incorporate into your work.
Our community is full of individuals skilled in MATLAB, and we're always eager to learn from one another. Who would you like to see featured next? Or perhaps you have some tips & tricks of your own to contribute. Remember, sharing knowledge is a collaborative effort, as Confucius wisely stated, 'When I walk along with two others, they may serve me as my teachers.'
Let's maintain our commitment to a continuous learning journey. This could be the perfect warm-up for the upcoming 2024 contest.
Hi All,
I'm trying to plot my observables in the analyzer and running into far more problems than expected. I have two species in my model that are invovled, blood.Insulin (pM) and blood.Glucose (mM), all I want to do is plot the ratio of these two (blood.Insulin/blood.Glucose (dimensionless)) along with my other species in Model Simulation, to compare it to the same ratio from my data.
First, there doesn't seem to be a way to directly add an observable to the logged states in 'Simulate Model', so I've tried to used 'Calculate Observable' based on the data from my last run (IVGTT.LastRun.results) but it says that units are required when unit conversion is enabled, but it should be dimensionless!
My next idea would be to make a non-constant parameter with a repeated assignment, but I feel like I should be able to do this without resorting to that?
Any help or ideas would be appreciated. Thank you, best regards,
Dan
I based my model construction on this PBPK model: PBPK by Armin Sepp. While this is a very convenient script for building a PBPK two-pore model, it's very incovenient for my application to have the species Units defined in molarity. Is there a convenient way to organically switch this model from molarity to grams (or any weight unit)?
Hi! I'm new to pk modeling and Matlab. Can someone guide me through how to conduct population pk modeling based on pk parameters from non-human primate studies? Much thanks!!!!
We are thrilled to announce the grand prize winners of our MATLAB Flipbook contest! This year, we invited the MATLAB Graphics Infrastructure team, renowned for their expertise in exporting and animation workflows, to be our judges. After careful consideration, they have selected the top three winners:
Judge comments: Creative and realistic rendering with well-written code
2nd place - Christmas Tree / Zhaoxu Liu
Judge comments: Festive and advanced animation that is appropriate to the current holiday season.
Judge comments: Nice translation of existing shader logic to MATLAB that produces an advanced and appealing visual effect.
In addition, after validating the votes, we are pleased to announce the top 10 participants on the leaderboard:
- Tim
- Zhaoxu Liu / slandarer
- KARUPPASAMYPANDIYAN M
- Dhimas Mahardika S.Si., M.Mat
- Augusto Mazzei
- Jenny Bosten
- Lucas
- Jr
- Victoria
- ME
Congratulations to all! Your creativity and skills have inspired many of us to explore and learn new skills, and make this contest a big success!
The MATLAB Flipbook Mini Hack contest has concluded! During the 4 weeks, over 600 creative animations have been created. We had a lot of fun and a great learning experience! Thank you, everyone!
Now it’s the time to announce week 4 winners. Note that grand prize winners will be announced shortly after we validate votes on winning entries.
Realism:
Holiday & Season:
Abstract:
Cartoon:
Congratulations, weekly winners!We will reach out to you shortly for your prizes.
Looking for an opportunity to practice your AI skills on a real-world problem? Interested in AI for climage change? Sign up for the Kelp Wanted challenge, which tasks participants with developing an algorithm that can detect the presence of kelp forests from satellite images.
Participants of all skill levels from anywhere in the world are welcome to compete!
MathWorks provides the following resources for all participants:
Have you marveled at the breathtaking, natural-looking animations crafted by the creative minds in the Flipbook Mini Hack contest? Think of @Tim, @Jenny Bosten, and @Zhaoxu Liu / slandarer- their work is nothing short of extraordinary.
So, what's their secret? Adam Danz, a developer in the MATLAB Graphics and Charting team and a top community contributor, has graciously unveiled the mysteries in his latest blog post - "Creating natural textures with power-law noise: clouds, terrains, and more." The post offers simple, step-by-step instructions and code snippets, empowering you to grasp these enchanting techniques effortlessly.
Check it out and we hope it sparks your creativity and serves as a wellspring of inspiration. With only 3 days remaining before the contest draws to a close, it's time to dive into the code and let your imagination soar!
In Week 3, we reached the 400-animations milestone! Let’s work together to achieve the 500-animations goal!
During the last week of the contest, we strongly encourage you to inspire your colleagues, classmates, or friends to vote. Voters will also have the opportunity to win a MATLAB T-shirt.
Mini Hack Winners - Week 3
Math, Physics, or Science explanation:
Most creative remix:
40:
Math is beautiful:
Mashup (Combined themes):
Nature:
Holidays:
Congratulations, winners!
In week 4, we’d love to see more entries in the following categories:
- Holidays:
- Seasons:
- Abstract:
- Mashup (mixed categories)
A gentle reminder that you have a direct impact on the next generation of animation tools in MATLAB! Don’t forget to share your thoughts and ideas with us.
i've finished writing the code for my ~masterpiece~ and it doesn't run on the contest new entry page. it runs on matlab on my desktop and in the matlab live editor in my browser, but not where i really need it to. usually it'll draw the first frame the first time i run the code in a new window, but not any subsequent times. whether i hit "run" or "create animation", the screen grays out as it's supposed to, but then returns to normal without generating the first frame or animation.
i'm not getting a timeout warning or any error messages. i timed the code on my laptop and it takes about 100ish seconds to run and generate the animation the first time i run it before clearing everything from my workspace (and then it takes about twice as long each subsequent time, which makes me a bit nervous. can't figure out why this is the case at all!), which is well within the 255 second limit for the contest. as far as i know, the most computationally expensive function i'm using is patch(). i'm pretty close to the character limit, but i don't know if that's part of the problem.
i tried vectorizing some of the code instead of using for loops, which made the code run slightly slower. i tried using a nested function instead of using drawframe() and an auxiliary function, but that didn't help. i tried clearing all variables except f at the end of drawframe() to no avail. i tried using the close command at the start of drawframe(), with similar success. i updated chrome, closed a bunch of windows, tried safari, used my sister's laptop, all with no luck.
has anyone else had this or a similar problem? any advice?
thanks!
Just in two weeks, we already have 300 entries and 2,000 votes! We are so impressed by your creative styles, artistic talents, and ingenious programming techniques.
Now, it’s time to announce the weekly winners!
Mini Hack Winners - Week 2
Time & Space:
Trees:
Cartoon:
Symbolism:
Realism:
Fractal:
Multi-Entry Stories:
Explanatory:
Light:
MATtropolis:
Congratulations! Each of you won your choice of a T-shirt, a hat, or a coffee mug. We will contact you after the contest ends.
New categories for Week 3!
- 40: MathWorks will celebrate its 40th Anniversary in 2024. You will have opportunities to win special prizes!
- Most creative remix
Categories we’d love to see more entries in
- Multi-Entry Stories (e.g. Jr’s Matzilla series)
- MATropolis
- Math/Physics Explanation
Finally, just a reminder that you have a direct impact on the next generation of animation tools in MATLAB! Don’t forget to share your thoughts and ideas with us.
Dear contest participants,
Happy Friday! I am thrilled to share some exciting news with you. Cleve Moler, the father of MATLAB, has just published a captivating blog post dedicated to our outstanding Flipbook Mini Hack contest!
In his blog post, Cleve expresses his genuine admiration for the multitude of creative styles, artistic talents, and ingenious programming techniques that have been showcased throughout the contest. What's even more remarkable is that he handpicked some of his personal favorites! You don't want to miss this opportunity to see what Cleve has to say.
But that's not all! Your exceptional animations have sparked immense interest among the MathWorks teams. This means you have a direct impact on the next generation of animation tools in MATLAB! We value your thoughts and ideas, so please don't hesitate to share them with us.
Let's keep up the phenomenal work in the remaining two weeks, and together, we'll continue to push the boundaries of creativity and innovation.
Wishing you all an incredible weekend ahead!
Enthusiastically yours,
Chen
