Gaussian process regression optimization

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H R
H R el 4 de Sept. de 2021
Comentada: H R el 26 de Jul. de 2022
Can anyone please let me know how can I exclude some Kernel functions from being optimized in the following regression process?
In other words, I would like to only include 'matern32', 'matern52', and 'ardmatern52' in the optimization process to fit a Gaussian regression model to the data. When I use the following code lots of other unwanted kernel functions are also tested.
thisModel = fitrgp(X,Y,'ConstantSigma' ,true, 'Sigma',0.001,'BasisFunction','none',...
'OptimizeHyperparameters',{'KernelFunction','KernelScale','Standardize'}','HyperparameterOptimizationOptions',...
struct('Optimizer', 'bayesopt', 'MaxObjectiveEvaluations', 45,'AcquisitionFunctionName','expected-improvement-per-second-plus','ShowPlots', false, 'UseParallel', true));
Many thanks.
  2 comentarios
Hiro Yoshino
Hiro Yoshino el 26 de Jul. de 2022
Seems like there are no ways to have subset of all the Kernels available.
how about running fitrgp(s) independently with the kernels fixed? You could use Parallel option too.
H R
H R el 26 de Jul. de 2022
I actually found a way to do this. You basically need to define the optimizableVariable separatly and then feed it to OptimizeHyperparameters.

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