The second input of the function medfilt1 determines the window size. In your case, the order will be however many samples it takes to 200 ms at 360 Hz. E.g. 0.600*fs = 216. Otherwise, it will be length(t)-1.
load 100m.mat
fs = 360;
t200 = 0:1/fs:0.2;
t600 = 0:1/fs:0.6;
figure(1);
plot(val)
x=medfilt1(val,length(t200)-1);
figure(2);
plot(x)
y=medfilt1(val,length(t600)-1);
figure(3);
plot(y)
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