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MATLAB linking error - CentOS 7 - R2020b

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Heinz Stockinger
Heinz Stockinger on 22 Sep 2020
Answered: gerco hassink on 22 Jul 2021
I've installed MATLAB R2020b on CentOS 7 and get the following error:
$ matlab
MATLAB is selecting SOFTWARE OPENGL rendering.
/Home/matlab/matlab/bin/glnxa64/MATLAB: symbol lookup error: /Home/matlab/matlab/bin/glnxa64/../../sys/os/glnxa64/libstdc++.so.6: undefined symbol: __cxa_thread_atexit_impl
$ gcc -v
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/software/libexec/gcc/x86_64-redhat-linux/6.1.1/lto-wrapper
Target: x86_64-redhat-linux
Configured with: ../configure --enable-bootstrap --enable-languages=c,c++,objc,obj-c++,fortran,go,lto --prefix=/software --mandir=/software/share/man --infodir=/software/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-shared --enable-threads=posix --enable-checking=release --enable-multilib --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --with-linker-hash-style=gnu --enable-plugin --enable-initfini-array --disable-libgcj --without-isl --enable-libmpx --enable-gnu-indirect-function --with-arch_32=x86-64 --with-arch=nocona --with-tune=core2 --with-multilib-list=m64 --oldincludedir=/software/include --build=x86_64-redhat-linux
Thread model: posix
gcc version 6.1.1 20160510 (Red Hat 6.1.1-2) (GCC)
Which compiler version and dependencies do you need to install to have MATLAB working?
Thank you,
Heinz
  4 Comments
gerco hassink
gerco hassink on 9 Jun 2021
I have the same problem on centos 7.6.1810.
I checked the solutions from Sai Sri Pathuri below, but they don't work and don't seem to make sense as well, but that could be me of course. Any help would be appreciated. Due to other software we prefer not to update the system too much
matlab installation worked fine
MATLABWindow runs as well
/usr/local/MATLAB/R2020b/bin/./matlab -nosplash -nodesktop
gives:
MATLAB is selecting SOFTWARE OPENGL rendering.
and then the prompt again
/usr/local/MATLAB/R2020b/bin/glnxa64/MATLAB -nosplash -nodesktop
gives:
/usr/local/MATLAB/R2020b/bin/glnxa64/MATLAB: symbol lookup error: /usr/local/MATLAB/R2020b/bin/glnxa64/../../sys/os/glnxa64/libstdc++.so.6: undefined symbol: __cxa_thread_atexit_impl
gcc -v
Ingebouwde specs worden gebruikt.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper
Target: x86_64-redhat-linux
Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux
Thread model: posix
gcc versie 4.8.5 20150623 (Red Hat 4.8.5-44) (GCC)

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Answers (2)


gerco hassink
gerco hassink on 22 Jul 2021
Turned out that it is a version problem. Matlab 2020 uses libstdc++.so.6.0.25 and our Centos 7 and other software on it use *.19 and we did not want to upgrade these. the only solution was to install an older version of matlab R2017b and this worked perfectly.

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