Error message when use geosoftread() function

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Cassie
Cassie on 18 May 2011
Hi I typed command such as "A = geosoftread('Datasets\GSE19536.soft')" It gave me error message as
Warning: Problems reading the GEO data. The structure may be incomplete. > In geosoftread at 265 Error in ==> geosoftread at 36 bioinfochecknargin(nargin,1,mfilename);
??? Output argument "outputStruct" (and maybe others) not assigned during call to "C:\Program Files\MATLAB\R2008a\toolbox\bioinfo\microarray\geosoftread.m (geosoftread)".
I used a R2008a Matlab and didn't know why this happen. Did someone encounter the same problem at the same version of Matlab ? Thanks

Answers (1)

Lucio Cetto
Lucio Cetto on 3 Jun 2011
In 2008a GEOSOFTREAD was only able to read data sets GDS and sample GSM files. Is your file a GSE file? You should use instead GEOSERIESREAD.

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