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Dimensional analysis fail for reaction on simbiology

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Lo
Lo el 4 de Sept. de 2023
Respondida: Arthur Goldsipe el 18 de Sept. de 2023
I have already tried adjusting the units of the reactants and parameters, but I still receive an error message. I'm not sure where the issue is.
  3 comentarios
Lo
Lo el 4 de Sept. de 2023
Editada: Lo el 4 de Sept. de 2023
I attempted to simulate recombinase polymerase amplification, and I have already found the necessary ODEs for simulation.
here is the diagram
here is the reactant's dosage and unit
here is the parameter's unit
here is the ODEs
Jeremy Huard
Jeremy Huard el 4 de Sept. de 2023
The first term of the rate rule in the first screenshot you sent (or rate rule #2 in your second post) is not dimensionally consistent with the left-hand side.
You get molarity/time=mole/volume/time for the left-hand side and for the term of the right-hand side:
(dimensionless/dimensionless) * (1/(molarity*time)) * mole * molarity = mole/time

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Arthur Goldsipe
Arthur Goldsipe el 18 de Sept. de 2023
It looks like this was answered in a comment on the question. I'll paste it here for completeness:
The first term of the rate rule in the first screenshot you sent (or rate rule #2 in your second post) is not dimensionally consistent with the left-hand side.
You get molarity/time=mole/volume/time for the left-hand side and for the term of the right-hand side:
(dimensionless/dimensionless) * (1/(molarity*time)) * mole * molarity = mole/time

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