How can my outputs be assigned to each image that is being processed

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I am processing around 168 images to get their perimeters, convex hulls, and get a ratio between those two. Here is my code:
for k = 27 : 194
jpgFileName = strcat('Slice_v2_', num2str(k), '.png');
if isfile(jpgFileName)
[X, cmap] = imread(jpgFileName);
else
fprintf('File %s does not exist.\n', jpgFileName);
end
RGB = ind2rgb(X,cmap);
gray_image = rgb2gray(RGB);
BW = imbinarize(gray_image);
comp = imcomplement(BW);
imshowpair(gray_image, comp, 'montage');
%figure(1) %used tat index i so old figures are not overwritten by new figures
%imshow(our_images)
stats = regionprops (comp,'Perimeter'); %this can change
allPerimeters = [stats.Perimeter];
convhulls = bwconvhull(comp);
imshowpair(convhulls, comp, 'montage');
stats1 = regionprops (convhulls,'Perimeter');
allPerimeters2 = [stats1.Perimeter];
sum1 = sum(allPerimeters);
sum2 = sum(allPerimeters2);
giratio = sum1/sum2;
end
I get "gi =" for each but they are not individually saved into the workspace, I see why that happens. Only the last slice is kept in the workspace. I want to be able to have all of the perimeters (I have a sum since I get a struct array of values becasue the image has multiple bodies, so I want to add them up) and thus distinguished as separate outputs in order to graph it. Each perimeter, convex hull and gi calculation assigned to each slice instead of just a raw calculation. like a gi1-gi168.

Respuestas (2)

Johannes Hougaard
Johannes Hougaard el 26 de Jun. de 2020
I would assign the outputs either to a multidimensional struct:
output = repmat(struct("RGB",[],...
"grayimage",[],...
"BW",[],...
"comp",[],...
"stats",[], ...
"giratio",[]),168,1);
for k = ...
output(k).RGB = ind2rgb(X,cmap);
...
end
or in a struct per variable with a field for each image
for k = ...
RGB.(strtok(jpgFileName,'.')) = ind2rgb(X,cmap);
...
end
Depending on whether you like your outputs organized mainly per image or per variable

Image Analyst
Image Analyst el 26 de Jun. de 2020
I'd put them into rows of a table.

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